WormBase Tree Display for Variation: WBVar00143220
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WBVar00143220 | Evidence | Paper_evidence | WBPaper00040589 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e450 | |||||
Other_name (18) | |||||||
HGVSg | CHROMOSOME_I:g.7435173C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | C44E1 | |||
Flanking_sequences | attcaagaagaagaggaaaaaaggaattat | aggaactttggcataatgcttacaagagag | |||||
Mapping_target | C44E1 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00040589 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (205) | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006752 | |||||
Transcript | ZK524.2e.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2e.1:c.1768C>T | ||||||
HGVSp | CE34626:p.Gln590Ter | ||||||
cDNA_position | 1768 | ||||||
CDS_position | 1768 | ||||||
Protein_position | 590 | ||||||
Exon_number | 13/30 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2c.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2c.1:c.745C>T | ||||||
HGVSp | CE34624:p.Gln249Ter | ||||||
cDNA_position | 745 | ||||||
CDS_position | 745 | ||||||
Protein_position | 249 | ||||||
Exon_number | 5/22 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2f.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2f.1:c.1777C>T | ||||||
HGVSp | CE43866:p.Gln593Ter | ||||||
cDNA_position | 1777 | ||||||
CDS_position | 1777 | ||||||
Protein_position | 593 | ||||||
Exon_number | 13/30 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2j.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2j.1:c.1732C>T | ||||||
HGVSp | CE51718:p.Gln578Ter | ||||||
cDNA_position | 1732 | ||||||
CDS_position | 1732 | ||||||
Protein_position | 578 | ||||||
Exon_number | 13/29 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2k.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2k.1:c.1723C>T | ||||||
HGVSp | CE51726:p.Gln575Ter | ||||||
cDNA_position | 1723 | ||||||
CDS_position | 1723 | ||||||
Protein_position | 575 | ||||||
Exon_number | 13/29 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2a.1:c.1768C>T | ||||||
HGVSp | CE15371:p.Gln590Ter | ||||||
cDNA_position | 1768 | ||||||
CDS_position | 1768 | ||||||
Protein_position | 590 | ||||||
Exon_number | 13/30 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2i.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2i.1:c.1777C>T | ||||||
HGVSp | CE32552:p.Gln593Ter | ||||||
cDNA_position | 1777 | ||||||
CDS_position | 1777 | ||||||
Protein_position | 593 | ||||||
Exon_number | 13/29 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2d.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2d.1:c.1768C>T | ||||||
HGVSp | CE34625:p.Gln590Ter | ||||||
cDNA_position | 1768 | ||||||
CDS_position | 1768 | ||||||
Protein_position | 590 | ||||||
Exon_number | 13/31 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
ZK524.2h.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK524.2h.1:c.745C>T | ||||||
HGVSp | CE51759:p.Gln249Ter | ||||||
cDNA_position | 745 | ||||||
CDS_position | 745 | ||||||
Protein_position | 249 | ||||||
Exon_number | 5/21 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
Interactor | WBInteraction000518876 | ||||||
WBInteraction000519037 | |||||||
WBInteraction000536820 | |||||||
WBInteraction000536821 | |||||||
Genetics | Interpolated_map_position | I | 2.07407 | ||||
Mapping_data | In_2_point (14) | ||||||
In_multi_point (75) | |||||||
In_pos_neg_data (45) | |||||||
Description (2) | |||||||
Reference (17) | |||||||
Method | Substitution_allele |