WormBase Tree Display for Variation: WBVar00143196

WBVar00143196 Evidence: Paper_evidence: WBPaper00003555
  Name: Public_name: e419
    Other_name: F58E6.10b.1:c.320_321delinsAG
      CE39164:p.Phe92Ter
      F58E6.10e.1:c.167_168delinsAG
      CE48350:p.Phe41Ter
      CE48409:p.Phe56Ter
      F58E6.10d.1:c.122_123delinsAG
      CE48141:p.Phe107Ter
      F58E6.10a.1:c.275_276delinsAG
    HGVSg: CHROMOSOME_V:g.9766966_9766967delinsCT
  Sequence_details: SMap: S_parent: Sequence: F58E6
    Flanking_sequences: tcaattccaggcggagacatcggacgacat actcaggaacaacttcaggagcttgatgct
    Mapping_target: F58E6
    Type_of_mutation: Substitution: tc ag Paper_evidence: WBPaper00003555
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004166
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006778
    Transcript: F58E6.10e.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F58E6.10e.1:c.167_168delinsAG
        HGVSp: CE48409:p.Phe56Ter
        cDNA_position: 240-241
        CDS_position: 167-168
        Protein_position: 56
        Exon_number: 4/8
        Codon_change: tTC/tAG
        Amino_acid_change: F/*
      F58E6.10d.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F58E6.10d.1:c.122_123delinsAG
        HGVSp: CE48350:p.Phe41Ter
        cDNA_position: 177-178
        CDS_position: 122-123
        Protein_position: 41
        Exon_number: 4/8
        Codon_change: tTC/tAG
        Amino_acid_change: F/*
      F58E6.10b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F58E6.10b.1:c.320_321delinsAG
        HGVSp: CE48141:p.Phe107Ter
        cDNA_position: 407-408
        CDS_position: 320-321
        Protein_position: 107
        Exon_number: 5/9
        Codon_change: tTC/tAG
        Amino_acid_change: F/*
      F58E6.10a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F58E6.10a.1:c.275_276delinsAG
        HGVSp: CE39164:p.Phe92Ter
        cDNA_position: 397-398
        CDS_position: 275-276
        Protein_position: 92
        Exon_number: 5/9
        Codon_change: tTC/tAG
        Amino_acid_change: F/*
    Interactor: WBInteraction000520814
  Genetics: Interpolated_map_position: V 2.16541
  Description: Phenotype: WBPhenotype:0000632 Paper_evidence: WBPaper00002837
        Curator_confirmed: WBPerson691
    Phenotype_not_observed: WBPhenotype:0000717 Paper_evidence: WBPaper00004906
        Curator_confirmed: WBPerson2021
        Remark: lin-11 expression in the AVA interneurons is unaltered in unc-42 mutants Paper_evidence: WBPaper00004906
            Curator_confirmed: WBPerson2021
        Phenotype_assay: Genotype: lin-11::gfp Paper_evidence: WBPaper00004906
              Curator_confirmed: WBPerson2021
  Reference: WBPaper00002837
    WBPaper00004906
  Remark: e419 comprises two substitutions of two adjacent bases. Paper_evidence: WBPaper00003555
  Method: Substitution_allele