WormBase Tree Display for Variation: WBVar00143187
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WBVar00143187 | Evidence | Paper_evidence | WBPaper00031105 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e408 | |||||
Other_name (23) | |||||||
HGVSg | CHROMOSOME_IV:g.10338170G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | K11E8 | |||
Flanking_sequences | acggatttgctggaactccaggatacttgt | gccagaagttctcaagaaggatccatactc | |||||
Mapping_target | K11E8 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00031105 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004165 | ||||||
WBStrain00022482 | |||||||
WBStrain00030762 | |||||||
WBStrain00056767 | |||||||
Laboratory | CB | ||||||
EN | |||||||
Status | Live | ||||||
Affects | Gene | WBGene00006779 | |||||
Transcript | K11E8.1f.2 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1f.2:c.536C>T | ||||||
HGVSp | CE28056:p.Ser179Leu | ||||||
cDNA_position | 766 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 7/18 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1e.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1e.1:c.536C>T | ||||||
HGVSp | CE28055:p.Ser179Leu | ||||||
cDNA_position | 833 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 8/19 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1h.2 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1h.2:c.536C>T | ||||||
HGVSp | CE28058:p.Ser179Leu | ||||||
cDNA_position | 770 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 7/19 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1d.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1d.1:c.536C>T | ||||||
HGVSp | CE28054:p.Ser179Leu | ||||||
cDNA_position | 760 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 7/17 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1g.2 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1g.2:c.536C>T | ||||||
HGVSp | CE28057:p.Ser179Leu | ||||||
cDNA_position | 770 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 7/18 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1f.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1f.1:c.536C>T | ||||||
HGVSp | CE28056:p.Ser179Leu | ||||||
cDNA_position | 847 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 8/19 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1h.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1h.1:c.536C>T | ||||||
HGVSp | CE28058:p.Ser179Leu | ||||||
cDNA_position | 832 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 8/20 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1e.2 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1e.2:c.536C>T | ||||||
HGVSp | CE28055:p.Ser179Leu | ||||||
cDNA_position | 766 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 7/18 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1g.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1g.1:c.536C>T | ||||||
HGVSp | CE28057:p.Ser179Leu | ||||||
cDNA_position | 836 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 8/19 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1k.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1k.1:c.536C>T | ||||||
HGVSp | CE28060:p.Ser179Leu | ||||||
cDNA_position | 536 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 5/14 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1i.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1i.1:c.536C>T | ||||||
HGVSp | CE28059:p.Ser179Leu | ||||||
cDNA_position | 771 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 7/16 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1d.2 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1d.2:c.536C>T | ||||||
HGVSp | CE28054:p.Ser179Leu | ||||||
cDNA_position | 847 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 8/18 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1r.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1r.1:c.866C>T | ||||||
HGVSp | CE45912:p.Ser289Leu | ||||||
cDNA_position | 866 | ||||||
CDS_position | 866 | ||||||
Protein_position | 289 | ||||||
Exon_number | 8/19 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
K11E8.1l.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | K11E8.1l.1:c.536C>T | ||||||
HGVSp | CE28061:p.Ser179Leu | ||||||
cDNA_position | 536 | ||||||
CDS_position | 536 | ||||||
Protein_position | 179 | ||||||
Exon_number | 5/14 | ||||||
Codon_change | tCg/tTg | ||||||
Amino_acid_change | S/L | ||||||
Interactor | WBInteraction000501679 | ||||||
Genetics | Interpolated_map_position | IV | 4.5762 | ||||
Mapping_data | In_multi_point | 764 | |||||
In_pos_neg_data | 956 | ||||||
2739 | |||||||
Description (2) | |||||||
Reference (12) | |||||||
Method | Substitution_allele |