WormBase Tree Display for Variation: WBVar00143179

WBVar00143179 Evidence: Paper_evidence: WBPaper00002007
  Name: Public_name: e399
    Other_name: C27H6.1a.1:c.4390C>T
      CE45344:p.Arg1464Ter
      CE45298:p.Arg1091Ter
      C27H6.1c.1:c.3271C>T
      CE45373:p.Arg1182Ter
      C27H6.1b.1:c.3544C>T
    HGVSg: CHROMOSOME_V:g.9967712G>A
  Sequence_details: SMap: S_parent: Sequence: C27H6
    Flanking_sequences: CCAATTCCTGAAGCTTGGATTTATTTATTC GAGAAGAACGTCATTGGGGAGTAGGATCAA
    Mapping_target: C27H6
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006777
    Transcript: C27H6.1b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C27H6.1b.1:c.3544C>T
        HGVSp: CE45373:p.Arg1182Ter
        cDNA_position: 3544
        CDS_position: 3544
        Protein_position: 1182
        Exon_number: 8/11
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      C27H6.1a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C27H6.1a.1:c.4390C>T
        HGVSp: CE45344:p.Arg1464Ter
        cDNA_position: 4402
        CDS_position: 4390
        Protein_position: 1464
        Exon_number: 11/14
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      C27H6.1c.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C27H6.1c.1:c.3271C>T
        HGVSp: CE45298:p.Arg1091Ter
        cDNA_position: 3271
        CDS_position: 3271
        Protein_position: 1091
        Exon_number: 6/8
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
  Genetics: Interpolated_map_position: V 2.22222
  Reference: WBPaper00002007
  Remark: Molecular details supplied via personal communication Person_evidence: WBPerson508
        WBPerson3035
  Method: Substitution_allele