WormBase Tree Display for Variation: WBVar00143036
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WBVar00143036 | Evidence | Paper_evidence | WBPaper00006063 | ||||
---|---|---|---|---|---|---|---|
WBPaper00005177 | |||||||
Name | Public_name | e207 | |||||
Other_name | F46E10.9.1:c.10C>T | ||||||
CE20819:p.Arg4Ter | |||||||
F46E10.9.2:c.10C>T | |||||||
HGVSg | CHROMOSOME_V:g.6513336G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F46E10 | |||
Flanking_sequences | ataaaacaagtcaattccagaatgctgctc | gattgctcgccgtgctcggacttttcgccg | |||||
Mapping_target | F46E10 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00006063 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004128 | ||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00001073 | |||||
Transcript | F46E10.9.2 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F46E10.9.2:c.10C>T | ||||||
HGVSp | CE20819:p.Arg4Ter | ||||||
cDNA_position | 164 | ||||||
CDS_position | 10 | ||||||
Protein_position | 4 | ||||||
Exon_number | 3/9 | ||||||
Codon_change | Cga/Tga | ||||||
Amino_acid_change | R/* | ||||||
F46E10.9.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F46E10.9.1:c.10C>T | ||||||
HGVSp | CE20819:p.Arg4Ter | ||||||
cDNA_position | 11 | ||||||
CDS_position | 10 | ||||||
Protein_position | 4 | ||||||
Exon_number | 2/8 | ||||||
Codon_change | Cga/Tga | ||||||
Amino_acid_change | R/* | ||||||
Genetics | Interpolated_map_position | V | -0.000884327 | ||||
Description | Phenotype (3) | ||||||
Reference | WBPaper00005177 | ||||||
WBPaper00006063 | |||||||
WBPaper00053410 | |||||||
Method | Substitution_allele |