WormBase Tree Display for Variation: WBVar00143025

WBVar00143025 Name: Public_name: e191
    Other_name: CE36087:p.Gln16Ter
      CE05183:p.Gln16Ter
      B0564.10a.1:c.46C>T
      B0564.10b.1:c.46C>T
    HGVSg: CHROMOSOME_IV:g.13119259C>T
  Sequence_details: SMap: S_parent: Sequence: B0564
    Flanking_sequences: gccacactgactgctatacaccagcagcag agtcgcataatcggtttgttttattttttg
    Mapping_target: B0564
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (11)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006766
    Transcript: B0564.10b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: B0564.10b.1:c.46C>T
        HGVSp: CE36087:p.Gln16Ter
        cDNA_position: 170
        CDS_position: 46
        Protein_position: 16
        Exon_number: 2/10
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      B0564.10a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: B0564.10a.1:c.46C>T
        HGVSp: CE05183:p.Gln16Ter
        cDNA_position: 283
        CDS_position: 46
        Protein_position: 16
        Exon_number: 2/10
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
    Interactor: WBInteraction000502940
      WBInteraction000503400
      WBInteraction000525407
      WBInteraction000541742
      WBInteraction000558281
      WBInteraction000576769
  Genetics: Interpolated_map_position: IV 8.20747
    Mapping_data: In_2_point: 97
        121
        317
        555
        729
        730
        823
        4659
      In_multi_point: 103
        110
        112
        113
        114
        126
        128
        131
        222
        223
        224
        258
        302
        418
        508
        625
        627
        628
        659
        660
        676
        677
        680
        681
        682
        689
        727
        763
        767
        896
        1129
        1130
        1216
        1263
        1520
        1613
        1614
        1615
        1616
        1617
        1619
        3134
        3252
        5467
        5470
      In_pos_neg_data (11)
  Description: Phenotype (28)
    Phenotype_not_observed: WBPhenotype:0000631 Paper_evidence: WBPaper00035198
        Curator_confirmed: WBPerson712
        Remark: Animals do not exhibit anterior convulsions when treated with pentylenetetrazole(PTZ). Paper_evidence: WBPaper00035198
            Curator_confirmed: WBPerson712
        Variation_effect: Null: Paper_evidence: WBPaper00035198
            Curator_confirmed: WBPerson712
        Affected_by: Molecule: WBMol:00004251 Paper_evidence: WBPaper00035198
              Curator_confirmed: WBPerson712
      WBPhenotype:0001426 Paper_evidence: WBPaper00004883
        Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: arIs37 Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
      WBPhenotype:0001645 Paper_evidence: WBPaper00040284
        Curator_confirmed: WBPerson2987
        Remark: Table S2 Paper_evidence: WBPaper00040284
            Curator_confirmed: WBPerson2987
      WBPhenotype:0001652 Paper_evidence: WBPaper00032446
        Curator_confirmed: WBPerson2021
  Reference (17)
  Method: Substitution_allele