WormBase Tree Display for Variation: WBVar00142975
expand all nodes | collapse all nodes | view schema
WBVar00142975 | Evidence | Paper_evidence | WBPaper00003757 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | e120 | ||||||
Other_name | F26C11.2.1:c.597+1G>A | |||||||
HGVSg | CHROMOSOME_II:g.9898071C>T | |||||||
Sequence_details (5) | ||||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (254) | ||||||||
Laboratory | CB | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006744 | ||||||
Transcript | F26C11.2.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | F26C11.2.1:c.597+1G>A | |||||||
Intron_number | 6/7 | |||||||
Interactor (16) | ||||||||
Genetics | Interpolated_map_position | II | 1.76951 | |||||
Mapping_data | In_2_point (49) | |||||||
In_multi_point (159) | ||||||||
In_pos_neg_data (22) | ||||||||
Marked_rearrangement | mIn1[unc-4(e120) dpy-10(e128)] | |||||||
mIn1[unc-4(e120)] | ||||||||
Description | Phenotype (24) | |||||||
Phenotype_not_observed | WBPhenotype:0000641 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Healthy, active. | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001426 | Paper_evidence | WBPaper00004883 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_assay | Genotype | arIs37 | Paper_evidence | WBPaper00004883 | ||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001645 | Paper_evidence | WBPaper00040284 | ||||||
Curator_confirmed | WBPerson2987 | |||||||
Remark | Table S2 | Paper_evidence | WBPaper00040284 | |||||
Curator_confirmed | WBPerson2987 | |||||||
Reference (54) | ||||||||
Remark | Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00006744 Donor | |||||||
Variation stub/paper connection generated from the May 2021 NN VFP dataset. | ||||||||
Created by WBPerson51134 from the NN_VFP_triage_pipeline | ||||||||
Method | Substitution_allele |