WormBase Tree Display for Variation: WBVar00142950
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WBVar00142950 | Evidence | Paper_evidence | WBPaper00005417 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | e78 | ||||||
Other_name | F41C6.1.2:c.1229G>A | |||||||
CE04538:p.Cys410Tyr | ||||||||
F41C6.1.1:c.1229G>A | ||||||||
HGVSg | CHROMOSOME_X:g.6894828G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F41C6 | ||||
Flanking_sequences | tccatactaaattcaaaaccacttaagctt | tggatgtcatccagtcggatcacttggaaa | ||||||
Mapping_target | F41C6 | |||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00005417 | |||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (12) | ||||||||
Laboratory | CB | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006746 | ||||||
Transcript | F41C6.1.1 (12) | |||||||
F41C6.1.2 (12) | ||||||||
Interactor | WBInteraction000500108 | |||||||
WBInteraction000500177 | ||||||||
WBInteraction000500190 | ||||||||
WBInteraction000500384 | ||||||||
WBInteraction000500890 | ||||||||
WBInteraction000500928 | ||||||||
WBInteraction000502341 | ||||||||
WBInteraction000502343 | ||||||||
WBInteraction000556211 | ||||||||
Genetics | Interpolated_map_position | X | -2.07168 | |||||
Mapping_data | In_2_point | 150 | ||||||
165 | ||||||||
185 | ||||||||
188 | ||||||||
236 | ||||||||
237 | ||||||||
3385 | ||||||||
In_multi_point (37) | ||||||||
In_pos_neg_data (16) | ||||||||
Description | Phenotype (14) | |||||||
Phenotype_not_observed | WBPhenotype:0000032 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
Remark | healthy | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000436 | Paper_evidence | WBPaper00040857 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Mutation did not cause SNB-1::VENUS localization defects. | Paper_evidence | WBPaper00040857 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000679 | Paper_evidence | WBPaper00035146 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | UNC-40::GFP is more ventrally localized as in wild type animals. | Paper_evidence | WBPaper00035146 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001426 | Paper_evidence | WBPaper00004883 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_assay | Genotype | arIs37 | Paper_evidence | WBPaper00004883 | ||||
Curator_confirmed | WBPerson712 | |||||||
Reference (21) | ||||||||
Method | Substitution_allele |