WormBase Tree Display for Variation: WBVar00142921
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| WBVar00142921 | Name | Public_name | e27 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence_details | SeqStatus | Pending_curation | |||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain (13) | |||||||||
| Laboratory | CB | ||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00001065 | |||||||
| Interactor | WBInteraction000501355 | ||||||||
| WBInteraction000501361 | |||||||||
| WBInteraction000501367 | |||||||||
| WBInteraction000519147 | |||||||||
| WBInteraction000519159 | |||||||||
| WBInteraction000537306 | |||||||||
| WBInteraction000571293 | |||||||||
| WBInteraction000571294 | |||||||||
| WBInteraction000571571 | |||||||||
| Genetics | Mapping_data | In_2_point (21) | |||||||
| In_multi_point | 313 | ||||||||
| 353 | |||||||||
| 354 | |||||||||
| 358 | |||||||||
| 394 | |||||||||
| 532 | |||||||||
| 536 | |||||||||
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| 2429 | |||||||||
| 2430 | |||||||||
| 2810 | |||||||||
| 5464 | |||||||||
| In_pos_neg_data (17) | |||||||||
| Description | Phenotype (7) | ||||||||
| Phenotype_not_observed | WBPhenotype:0000505 | Paper_evidence | WBPaper00001328 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | Males are not Ram. | Paper_evidence | WBPaper00001328 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Anatomy_term | WBbt:0006941 | PATO:0000460 | Paper_evidence | WBPaper00001328 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| Life_stage | WBls:0000056 | PATO:0000460 | Paper_evidence | WBPaper00001328 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Temperature | 20C | Paper_evidence | WBPaper00001328 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Genotype | him-5(e1490) | Paper_evidence | WBPaper00001328 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000645 | Paper_evidence | WBPaper00000465 | |||||||
| Person_evidence | WBPerson261 | ||||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | non-roller | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Life_stage | WBls:0000002 | PATO:0000460 | Paper_evidence | WBPaper00000465 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Temperature | 16C, 25C | Paper_evidence | WBPaper00000465 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0001412 | Paper_evidence | WBPaper00000465 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Life_stage | WBls:0000041 | PATO:0000460 | Paper_evidence | WBPaper00000465 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Temperature | 25C | Paper_evidence | WBPaper00000465 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0001516 | Paper_evidence | WBPaper00000465 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Life_stage | WBls:0000041 | PATO:0000460 | Paper_evidence | WBPaper00000465 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Temperature | 25C | Paper_evidence | WBPaper00000465 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0001732 | Paper_evidence | WBPaper00032033 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | Animals exhibited the same pH survival profile as the wild-type strain over a range of pH 3 to pH 10. | Paper_evidence | WBPaper00032033 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Treatment | Mixed or synchronised populations of nematodes were exposed to 500ul M9 buffer (100 mM phosphate, 85 mM NaCl, 1 mM MgSO4 buffered at the appropriate pH by varying KH2PO4 and Na2HPO4 concentrations accordingly) at varying pHs in a 24-well plate format for 4 h (200 nematodes/well). Nematodes were scored as viable by the presence of touch response and pharyngeal pumping. | Paper_evidence | WBPaper00032033 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Reference | WBPaper00001328 | ||||||||
| WBPaper00000031 | |||||||||
| WBPaper00005747 | |||||||||
| WBPaper00000465 | |||||||||
| WBPaper00032033 | |||||||||
| WBPaper00053771 | |||||||||
| WBPaper00065103 | |||||||||
| Method | Allele |
