WormBase Tree Display for Variation: WBVar00142886

WBVar00142886 Evidence: Paper_evidence: WBPaper00005155
  Name: Public_name: dx27
    Other_name: F58D5.4c.1:c.625-38_871del
      F58D5.4b.1:c.781-38_1027del
      F58D5.4a.1:c.901-38_1147del
    HGVSg: CHROMOSOME_I:g.12050259_12050543del
  Sequence_details: SMap: S_parent: Sequence: F58D5
    Flanking_sequences: caaaattgttatatatttggcattaaaaac acaatccgaatcgagtcgttgttacggatt
    Mapping_target: F58D5
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035414
    Laboratory: EJ
    Status: Live
  Affects: Gene: WBGene00002240
    Transcript: F58D5.4c.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58D5.4c.1:c.625-38_871del
        cDNA_position: ?-871
        CDS_position: ?-871
        Protein_position: ?-291
        Intron_number: 3/4
        Exon_number: 4/5
      F58D5.4b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58D5.4b.1:c.781-38_1027del
        cDNA_position: ?-1043
        CDS_position: ?-1027
        Protein_position: ?-343
        Intron_number: 6/8
        Exon_number: 7/9
      F58D5.4a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F58D5.4a.1:c.901-38_1147del
        cDNA_position: ?-1163
        CDS_position: ?-1147
        Protein_position: ?-383
        Intron_number: 6/8
        Exon_number: 7/9
  Genetics: Interpolated_map_position: I 13.0229
  Reference: WBPaper00005155
  Method: Deletion_allele