WormBase Tree Display for Variation: WBVar00130424
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WBVar00130424 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00130424 | ||||
Other_name | cbs65945 | |||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc4260b | ||
Flanking_sequences | ttttttcgatctttgatgtatgaagatatctttgatgtatgaagatataa | tggacaaaaaacatttcagactgtgtcgtcgtcgtttcctactgtcactt | ||||
Mapping_target | cb25.fpc4260b | |||||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | AATT | Sse9I, TasI, Tsp509I, TspEI | 155 113 108 102 82 71 63 62 57 52 41 39 33 22 | ||
Polymorphic_strain_digest | AATT | Sse9I, TasI, Tsp509I, TspEI | 127 113 108 102 91 82 71 62 57 52 41 39 33 22 | |||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |