WormBase Tree Display for Variation: WBVar00130406

WBVar00130406 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00130406
    Other_name: cbs65927
    HGVSg: chrIV:g.4552190C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4260b
    Flanking_sequences: gaaacaaaggaataatcagttctccttttctcggggctcccgagaggtga cccggagaaggggcctggggcctggggcctgaatccgtgttaccttgacc
    Mapping_target: cb25.fpc4260b
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (22)
      Polymorphic_strain_digest (22)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00040442
    Transcript: CBG21746.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG21746.1:c.1111-354G>A
        Intron_number: 10/10
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP