WormBase Tree Display for Variation: WBVar00118220

WBVar00118220 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00118220
    Other_name: cbs53741
    HGVSg: chrI:g.7752607T>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2852
    Flanking_sequences: agtgctccgaaggattggctcgacttgccattttgtcatgtttactgccg cattttatctcattttctcctactcttctcttatctttttatccaaaaag
    Mapping_target: cb25.fpc2852
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (25)
      Polymorphic_strain_digest (25)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00033078
    Transcript: CBG12070a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12070a.1:c.462-129A>G
        Intron_number: 4/35
      CBG12070b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12070b.1:c.-1278-129A>G
        Intron_number: 3/46
      CBG12070d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12070d.1:c.462-129A>G
        Intron_number: 3/32
      CBG12070e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG12070e.1:c.462-129A>G
        Intron_number: 3/32
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP