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WormBase Tree Display for Variation: WBVar00118126

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Name Class

WBVar00118126EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00118126
Other_namecbs53647
HGVSgchrI:g.7470442G>C
Sequence_detailsSMapS_parentSequencecb25.fpc2852
Flanking_sequencescacatcacagaatgtccggtcacttaccattcgttggctgagactgaattgaggttgctgttgaatattagcatagaatggagccgatgaatggccaggt
Mapping_targetcb25.fpc2852
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (25)
Polymorphic_strain_digest (25)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00033023
TranscriptCBG12008.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScCBG12008.1:c.1334C>G
HGVSpCBP38530.1:p.Pro445Arg
cDNA_position1334
CDS_position1334
Protein_position445
Exon_number6/10
Codon_changecCa/cGa
Amino_acid_changeP/R
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP