WormBase Tree Display for Variation: WBVar00113237

WBVar00113237 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00113237
    Other_name: cbs48758
    HGVSg: chrI:g.6125280T>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc1417
    Flanking_sequences: agagcagaacccagaagctctaatcccctcttggattgccccacctcatc aggaaaggggaggtatacggtaggtcactttgaaagaataggaaagcatc
    Mapping_target: cb25.fpc1417
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CTAG BfaI, MaeI, XspI 501 499
      Polymorphic_strain_digest: CTAG BfaI, MaeI, XspI 1000
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00030075
    Transcript: CBG08244a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG08244a.1:c.964+70A>T
        Intron_number: 7/8
      CBG08244b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG08244b.1:c.925+70A>T
        Intron_number: 6/7
      CBG08244c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG08244c.1:c.928+70A>T
        Intron_number: 7/9
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP