WormBase Tree Display for Variation: WBVar00110674

WBVar00110674 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00110674
    Other_name: cbs46195
    HGVSg: chrV:g.18799795A>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0129
    Flanking_sequences: atacattcttttttcagaatccgagaacgtccaccaacatactcgccacg gatgccagtagcccaacccttgttcccatccgctcttctatccgttgtcc
    Mapping_target: cb25.fpc0129
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (16)
      Polymorphic_strain_digest (16)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00027983
    Transcript: CBG05555a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG05555a.1:c.5783T>G
        HGVSp: CBP41304.1:p.Val1928Gly
        cDNA_position: 6094
        CDS_position: 5783
        Protein_position: 1928
        Exon_number: 24/35
        Codon_change: gTg/gGg
        Amino_acid_change: V/G
      CBG05555b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG05555b.1:c.5642T>G
        HGVSp: CBP38139.1:p.Val1881Gly
        cDNA_position: 5642
        CDS_position: 5642
        Protein_position: 1881
        Exon_number: 22/33
        Codon_change: gTg/gGg
        Amino_acid_change: V/G
      CBG05555c.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG05555c.1:c.5756T>G
        HGVSp: CBP45194.1:p.Val1919Gly
        cDNA_position: 5756
        CDS_position: 5756
        Protein_position: 1919
        Exon_number: 22/33
        Codon_change: gTg/gGg
        Amino_acid_change: V/G
      CBG05555d.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG05555d.1:c.5615T>G
        HGVSp: CBP38642.1:p.Val1872Gly
        cDNA_position: 5615
        CDS_position: 5615
        Protein_position: 1872
        Exon_number: 21/31
        Codon_change: gTg/gGg
        Amino_acid_change: V/G
      CBG05555f.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG05555f.1:c.*1351T>G
        cDNA_position: 5785
        Exon_number: 23/31
      CBG05555f.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG05555f.2:c.*1324T>G
        cDNA_position: 5758
        Exon_number: 22/31
      CBG05555f.3 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG05555f.3:c.*1324T>G
        cDNA_position: 5758
        Exon_number: 22/23
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP