WormBase Tree Display for Variation: WBVar00106863
expand all nodes | collapse all nodes | view schema
| WBVar00106863 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00106863 | |||
| Other_name | pas11722 | ||||
| cewivar00628454 | |||||
| Y48B6A.3.1:c.288+162G>A | |||||
| HGVSg | CHROMOSOME_II:g.14156236G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y48B6A | |
| Flanking_sequences | tctatacctggatatgaacggtattatccatccgtgcacccatccagaagacaggccggctccgaagaacgaagatgagatgttcgcgctcattttcgagtacatcgatcgcatttattcgattgtcagaccgcgaagggtaaggaaaatcctcaaaaaatgtggaaatgggtcccaaccacgatccacgtcgcctagggtcgctgctgatgaatttcctgaacaaaaagagcattttccaggcgctagaaaccagcgttttacctagaaaatagtgaaaaatagcgattttcgcgtgaa | aactcaatgaaaggtagcaaaacctcaaaaattcaacattttttaagcaaaaagacgcggaatacttcaacacttaacgttaataatcatttttagctttaaaatctactctggaaaaaggtcccgccacatggatttttgctagaaaaaaccccccgtaaattccagcttctctatatggcgatcgatggagttgctccgcgagccaagatgaaccagcagcgaagtcgtcgattccgggcgagtaaagagatggctgaaaaggaggcgagcatcgaagagcaaagaaatcgattgatg | |||
| Mapping_target | Y48B6A | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01319398 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006964 | |||
| Transcript | Y48B6A.3.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48B6A.3.1:c.288+162G>A | ||||
| Intron_number | 2/8 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
