WormBase Tree Display for Variation: WBVar00106402
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| WBVar00106402 | Name | Public_name | WBVar00106402 | ||
|---|---|---|---|---|---|
| Other_name | pas11261 | ||||
| snp_Y46G5A[14] | |||||
| cewivar00016280 | |||||
| Y46G5A.25:n.728-15G>C | |||||
| HGVSg | CHROMOSOME_II:g.12834774C>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y46G5A | |
| Flanking_sequences | gcaatgaaaattggccagttgatagagttgatgtccaatagtccctttgaaggttttacaatgtagttgctgaaaattttgagtttttacagatggaaatatgaaaaggaaaccaacttgaaaaactgctcagaggcacctgtgaggtttacatttgcatagtctttaaagtcgtggcaagacccgttcatgaagatgagtcgcttcgggatggggtttgtgaggttccagccgaagggcttcgcaccattacatcgtttttgagcgggaatgtcgaagcaggtcgctgaaaaagttacg | agtaggtgcgagcccgtgacatgtgtgccgcagagtacttgcttggctgctgcgccggactaatgatgatacctgttaagtgtcggctgcaccaaatgaaaagaaataaagcaaaattttaaacctgtaaaatgtcgagcgcgaaagcaaattcaggaaccagctaactagtaagtgccagaatttccttttcacatcattactactgaatgctcatggcctgtaagatgtcggccgcgttattagcaacttacatctatcgttccacttattttcacagtgactccaatatccggaatt | |||
| Mapping_target | Y46G5A | ||||
| Type_of_mutation | Substitution | C | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (32) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar01380456 | |||
| WBVar01248961 | |||||
| WBVar00247281 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004903 | |||
| Pseudogene | Y46G5A.25 | VEP_consequence | intron_variant,non_coding_transcript_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y46G5A.25:n.728-15G>C | ||||
| Intron_number | 3/9 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
