WormBase Tree Display for Variation: WBVar00106176
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| WBVar00106176 | Name | Public_name | WBVar00106176 | ||
|---|---|---|---|---|---|
| Other_name | pas11035 | ||||
| uCE2-2098 | |||||
| haw134244 | |||||
| cewivar00014051 | |||||
| C44C11.1a.1:c.417+114C>T | |||||
| HGVSg | CHROMOSOME_II:g.12347160G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C44C11 | |
| Flanking_sequences | tgtgaagaaataggtcgctggttcgaccccgcgcacgcaattttcttttttgtatagtttttaggctcaaaaaatcttcaaaggagtaaaaactctcgtttcaaaaaaaatttctatactacttcgtacacatgtcaggtggaatcccataactccttttcttttttcggaaaccctatttccgccgattttttgcctccgatccccatttttctcaatcaacttcttgtgctctccgagcaaaaagcaaaaagctggagaggaagagtgtcgtgcgcgtttggcagtgaaaaatgttgc | atttttatggccttgggtatgggtcaaatcggagctaatgggtacttggaacatcttgttgggaagttgagcaaatttttgaaaatttttttgaaaaaattttcaaaacttacgtgtctctcattttccaaatctgctttattgcccactagtataattggaaaatcatctcgatccttgattcggcatattaattcgtgtagctttttgacctcttcgaaactggaaaaattatggagttaaaatgtttttcaacaagtttttctaaaatttggtagcacgacttaaaacggccatatc | |||
| Mapping_target | C44C11 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (27) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| History | Acquires_merge | WBVar00554109 | |||
| WBVar00269126 | |||||
| WBVar01378818 | |||||
| WBVar01247207 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004310 | |||
| Transcript | C44C11.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44C11.1a.1:c.417+114C>T | ||||
| Intron_number | 5/7 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | WGS_Pasadena_Quinlan |
