WormBase Tree Display for Variation: WBVar00105969
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| WBVar00105969 | Name | Public_name | WBVar00105969 | ||
|---|---|---|---|---|---|
| Other_name | pas10828 | ||||
| snp_F13D12[6] | |||||
| haw29375 | |||||
| cewivar00095604 | |||||
| F13D12.10a.1:c.362-25G>A | |||||
| F13D12.10b.1:c.278-25G>A | |||||
| HGVSg | CHROMOSOME_II:g.11716479G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F13D12 | |
| Flanking_sequences | ctttggcagcacatatgccggtggcccttggctttatcacatcattaaaactaacacaatgaaaatattgcctgtttttctatatttttggagttgaaaagttctgaatatctttaagactaacctgctgcgactcatggtgcatcgaagagttgctctcaaagttttggttgcttataccttggctttatcacaaaaacatcaactggcaaaatattttacctggttttctacattttgaagttaaaaatatacttaaatttataatattaacctagatagaagatgtcaaagtagaag | aataattaccaaaatttcttacagaaggcctcacaaatgccgaattcttcgttctcaccggaatcgttctaactctcgttcttttcctctgtatgaaactctcacatattctctacaaaggatttgtgagtgtccggacccagaatatgacccgctaccggataacagagtctgttcagaggacggattccgttttgaagccaagctatgtttaattgtttatgttcgaattttttgtccctttagttttaatcatttctcttttccgcgtcatttgatatcatcttttactttccattt | |||
| Mapping_target | F13D12 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (83) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01440183 | |||
| WBVar00176125 | |||||
| WBVar01377119 | |||||
| WBVar01312300 | |||||
| WBVar00244188 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008744 | |||
| Transcript | F13D12.10a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F13D12.10a.1:c.362-25G>A | ||||
| Intron_number | 5/6 | ||||
| F13D12.10b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F13D12.10b.1:c.278-25G>A | ||||
| Intron_number | 3/3 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
