WormBase Tree Display for Variation: WBVar00105106
expand all nodes | collapse all nodes | view schema
WBVar00105106 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00105106 | |||
Other_name | pas9965 | ||||
cewivar00052686 | |||||
Y43F8C.1.1:c.-293C>G | |||||
HGVSg | CHROMOSOME_V:g.19607218C>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y43F8C | |
Flanking_sequences | ttcattttccgcggagatatgaaggttcaaagtttggagggtgagagagtatggtggagagggagagcgcagagaggcacacaccctgcgtctctccgccacccacactgtctcgcttcaaaacttcgaacgcgcataacttcttaacggtcagagatatcgaaaaaattcgtaaaagaaaaatgtttagcgcaacattttgcgttcattaagaaaacttttcacaaaaagaattcaaatatttagacaattttaggggacaaatgtttttgtcaggtcaaaatgttaatttgatcaagc | tttgtgattataacaacgttttccgaccaaaaaaaaagtgtagaattcaccgaatttctccagtttttcggggtaaagtgtaaaattttggaccagaattgtcttgttttaatgatcatcgccgatcatcgaaacagattcggcatattgataaaaatgacgtcaccttgaaaattgtatagtataaaatgcgttgattttcttataaacttcaattatttttctacacttttcgagatatttttcaaccaaattttatcgatatcttcttttcccagatttttttttcaatatgcaatc | |||
Mapping_target | Y43F8C | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (107) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01466048 | |||
Status | Live | ||||
Affects | Gene | WBGene00003763 | |||
Transcript | Y43F8C.1.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8C.1.1:c.-293C>G | ||||
cDNA_position | 1039 | ||||
Exon_number | 1/4 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |