WormBase Tree Display for Variation: WBVar00102717
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| WBVar00102717 | Name | Public_name | WBVar00102717 | ||
|---|---|---|---|---|---|
| Other_name | pas7576 | ||||
| snp_B0454[3] | |||||
| cewivar00007563 | |||||
| B0454.26.1:c.371+10A>T | |||||
| HGVSg | CHROMOSOME_II:g.3037233T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | B0454 | |
| Flanking_sequences | gccaaagcacaagaaatgcgtcaagtcacgataaatgcgccaaggcactcaaaacgagccaagtcttgataaatgcgccagggcaccgaaaaagcgtcaagacactacaaaagcgtgaagttactaaaaaggcgccagatgactaaaaacgcgccaagtcttgataattgcgccaggtcaccaaaaaagcgttaagtcacgaaaaaggcgccaaggcactagaaaaacgtcaagctaccagaaacgcgccaagacattaggaatgcgccaagacacaagaaatgcgccaaatctttaaaa | atgacccacctgccaggaaccgagtaatcgtccaattccactctaatcgtccgcatctttgtcgtgctctttgtgcaatcgtgcaagactagtgcgtacagctcataggtcttctgcaacaaaaaaaacgtttactcgaacttcctgtggtgacgaacatcataaaacgcattgccaaacaagatcccataattattgtccatcgactcgcccttatcaccatttccaatattatccaaccgggtggctttggtgtccgccgtgaaactgaaagaaaatcaataatttggagtcactgtg | |||
| Mapping_target | B0454 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar01366052 | |||
| WBVar01234860 | |||||
| WBVar01300793 | |||||
| WBVar00242858 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00206372 | |||
| Transcript | B0454.26.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0454.26.1:c.371+10A>T | ||||
| Intron_number | 5/6 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
