WormBase Tree Display for Variation: WBVar00099946
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WBVar00099946 | Name | Public_name | WBVar00099946 | ||
---|---|---|---|---|---|
Other_name | pas4805 | ||||
cewivar00108022 | |||||
C30A5.7b.1:c.54+652A>T | |||||
HGVSg | CHROMOSOME_III:g.8215591T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C30A5 | |
Flanking_sequences | taattaaaaaatatgattaccatgaaatagggctgctagaatttttatttggaaactactcagaaccaggtaaaccagtaatgttatgacctactactatgctaacaactgataataaattacatacaaagttgatatattttctggagattttaagaaaatcatcgcaaagcttaatttaaaagtgaaaatatctttgaaaatcaatattcaaaattgtagaaatccattgaaacttgacataaaaatcagcaagcagtgttgttcatcagtagtagaaatgacattttctgattgttt | aaaaaatcagcgaagttcgagtgtatccctcttaatgtggctgttttagaatatttattcattattgtactgtacaaattaaaatatgtacttttatagaggaaataaacgttttcgtaaatctaggccaatgaaaaaatggttcagaatttcctttccagcaaaaccataatttttttttaaaataatgtgattgacgtaacgttatcatatgattggatcattctaaagaaaaagcctggtgaaatgtaatttgaatcagtgaaactgacagtctacatatgtcgacaatttacagtt | |||
Mapping_target | C30A5 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006818 | |||
Transcript | C30A5.7b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C30A5.7b.1:c.54+652A>T | ||||
Intron_number | 2/7 | ||||
Method | WGS_Pasadena_Quinlan |