WormBase Tree Display for Variation: WBVar00098363
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| WBVar00098363 | Name | Public_name | WBVar00098363 | ||
|---|---|---|---|---|---|
| Other_name | pas3222 | ||||
| uCE2-776 | |||||
| haw18261 | |||||
| haw125251 | |||||
| cewivar00080923 | |||||
| T07H3.10:n.1109C>A | |||||
| HGVSg | CHROMOSOME_II:g.1580817G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T07H3 | |
| Flanking_sequences | tgcgaagttcaaattttttgaaacaattttgttatcagtagtgaacttctccaatcatttgctgatgtcatagaaaacacagaattgacaaaaaagtgttcggtgcttcaagtcccccagacttgcctctagaaatgcagaatatagttgatcacgccactaggataatagtggtcataaatggtatctgaagatttatttttttcattattaaacgctttcagtggtctttattttataaaatccaaaaattaaaggaactaggaagttattgatttgatgtattccagtggtttctga | agggaatcttctcgaatcgggcttcaaatccgttccctttcccggtgccattcgacctgaatgtcaccaacattgcgcttccacttgatgccacagagaactcatcactgttgtgtcctttgaatgttccgattaagcggttttcatccaaatctccatcatagacttttacctcgtcactttttgggtcaatgtcaaaggtcgtgaatgttagcagtatactgtagaaacccggagtgtgcattcgatattcacaatactttttcaggacgtttgcagatatatttccttgtcacattg | |||
| Mapping_target | T07H3 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | SNP_Swan | |||
| WGS_De_Bono | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar01295322 | |||
| WBVar00545116 | |||||
| WBVar00165011 | |||||
| WBVar00267951 | |||||
| WBVar01360738 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00219321 | |||
| Pseudogene | T07H3.10 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T07H3.10:n.1109C>A | ||||
| cDNA_position | 1109 | ||||
| Exon_number | 3/3 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | WGS_Pasadena_Quinlan |
