WormBase Tree Display for Variation: WBVar00097348

WBVar00097348 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00097348
    Other_name: pas2207
      cewivar00072461
      C45E1.1a.1:c.861+44T>A
      C45E1.1a.2:c.861+44T>A
      C45E1.1c.1:c.879+44T>A
      C45E1.1b.1:c.786+44T>A
    HGVSg: CHROMOSOME_I:g.3108767T>A
  Sequence_details: SMap: S_parent: Sequence: C45E1
    Flanking_sequences: aacaacaaataaatgaattcttactgatacttccattttcagccgagtcgctgaacgaataatcgatcaagtgacgaatccaatgagatcgttacatatgaacgaaatcgagtatatcgctctgaaagctatcgccttttttgatccatgtaagtatacaaatccttgttgaattatttttcctacagaggattttttcagtggcaaaaggaatcacaagcgagtcgtacagtgatgtagaggaaatgcgacaacgggtgggtattatgaaagagatttttagaaaatgtcttttttttt aatttcggaaagaaggtctttgaaataatattgatcataagtttcatgtcagaattaaattatcctttttagtgtattaataaaatcatacgaatcaagggtgagccgcaaacgattttttctggcaaattgaaaaatcggcaaattgccagaattaaagtttccggcaaaccgacaaattgacggaattaaaaatttccggtaaatcggcaaacctgcaagttgccaatttgccgaatttgtcgacaaaaaatttgtcgaacctccgttgccgctcaacttgaacggcaatttaccgat
    Mapping_target: C45E1
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Person: WBPerson6900
    Analysis: WGS_Pasadena_Quinlan
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01421358
    Status: Live
  Affects: Gene: WBGene00003654
    Transcript: C45E1.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1b.1:c.786+44T>A
        Intron_number: 6/6
      C45E1.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1c.1:c.879+44T>A
        Intron_number: 8/8
      C45E1.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1a.2:c.861+44T>A
        Intron_number: 9/10
      C45E1.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1a.1:c.861+44T>A
        Intron_number: 8/9
  Reference: WBPaper00037807
  Method: WGS_Pasadena_Quinlan