WormBase Tree Display for Variation: WBVar00097344
expand all nodes | collapse all nodes | view schema
| WBVar00097344 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00097344 | |||
| Other_name | pas2203 | ||||
| cewivar00072444 | |||||
| C45E1.1c.1:c.13+1120A>G | |||||
| C45E1.1a.2:c.-6+1120A>G | |||||
| HGVSg | CHROMOSOME_I:g.3103115A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C45E1 | |
| Flanking_sequences | tcgttaaaatttaaaaaatctgcaacttttaagcaatttttgatggaaaaacgcttaggatccgagaaattttttattattattattttctaacaaaattttttcaagttttttgcgatttttgaagattttaggccgaaaaaaaatttaatggaaatttcagaaaaaaacgcgtcgttttttgctaaaaaaaagtttaactaaatttttttaagagaaaaaaattatcgaaaaaaaaaccattgtcttcttggttttttgttggaaattttagatttttttttgatttttcggtccaaa | ttcatgtgtagtccttttggaaaacttaaaaacttagacccgaaaaaaagaattcctgatgttcgtagcgtgcttgttgtacccccaaaagaaacatatttatgataaaaccataataagaccttatctatcgatcagtcagccgtcagtcgaccacctcgtggcacgcttctcttcttttctttctattctcgtctcgagacctatttcttttagtttcgtgaacttttattttcgtgcgaaattgttcgaaaatgtgatagatatagttaaaattgaataaaaaagctaacatttcca | |||
| Mapping_target | C45E1 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (16) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01421345 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00003654 | |||
| Transcript | C45E1.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C45E1.1c.1:c.13+1120A>G | ||||
| Intron_number | 1/8 | ||||
| C45E1.1a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C45E1.1a.2:c.-6+1120A>G | ||||
| Intron_number | 1/10 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
