WormBase Tree Display for Variation: WBVar00097001
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WBVar00097001 | Name | Public_name | WBVar00097001 | ||
---|---|---|---|---|---|
Other_name | pas1860 | ||||
uCE1-635 | |||||
haw3460 | |||||
haw114682 | |||||
cewivar00071203 | |||||
F12B6.1a.1:c.4722+123T>C | |||||
F12B6.1b.1:c.4611+123T>C | |||||
HGVSg | CHROMOSOME_I:g.2260247A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F12B6 | |
Flanking_sequences | ttgccgatttgccaaatttgtacgcggcaattgccgctaacccctgcactgagccattctcggccaagtttaagcttgttgtccaagtttttcaaaaaaatattggcttggatcagaaaatgacaaaacttgggcaaaacttgggcaaggcctcactcaagtttatccaaattttaatttttccgttttaacctcggccaaattttggctaaacttgggtgcagtctaagccaagtcttgtccaaatattgccaatttttctaaatggcaatactttttttctggttttcaaaattttcg | cttcggactcctgccagtttggtctgtgaggatttttttttgttttttttcatacgacacaaagtcatttgagattcaggcactaggaattaaattaatcgttttttttttcacaaacctaccatatcatacaagtaactcgtcacccaatatgtcacttttctcaatccaccgactagctgcaagtgcaaagcctcgcaaatccgatcctcaaccagatagactgtaaatccagccgggatcattgacagaaccagaaggagaatagtgattcgaaatactgcaagcgcttgggtgaac | |||
Mapping_target | F12B6 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (36) | |||||
Laboratory | AX | ||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson4037 | |||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00150210 | |||
WBVar01330505 | |||||
WBVar01419532 | |||||
WBVar00266835 | |||||
WBVar01279212 | |||||
WBVar00534547 | |||||
Status | Live | ||||
Affects | Gene | WBGene00000020 | |||
Transcript | F12B6.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F12B6.1a.1:c.4722+123T>C | ||||
Intron_number | 26/33 | ||||
F12B6.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F12B6.1b.1:c.4611+123T>C | ||||
Intron_number | 26/32 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
WBPaper00005369 | |||||
Method | WGS_Pasadena_Quinlan |