WormBase Tree Display for Variation: WBVar00095034
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WBVar00095034 | Evidence | Paper_evidence | WBPaper00004879 | |||
---|---|---|---|---|---|---|
Name | Public_name | oy26 | ||||
Other_name | CE51681:p.Ala221Val | |||||
Y113G7A.6d.1:c.662C>T | ||||||
Y113G7A.6c.1:c.587C>T | ||||||
CE31090:p.Ala233Val | ||||||
Y113G7A.6a.1:c.698C>T | ||||||
CE43026:p.Ala196Val | ||||||
CE31091:p.Ala180Val | ||||||
Y113G7A.6b.1:c.539C>T | ||||||
HGVSg | CHROMOSOME_V:g.20056897G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y113G7A | ||
Flanking_sequences | atccggatattttcatgcgggaagacatgg | ccacaaaattcaactccccgagagcagagt | ||||
Mapping_target | Y113G7A | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031125 | |||||
Laboratory | PY | |||||
Status | Live | |||||
Affects | Gene | WBGene00006652 | ||||
Transcript | Y113G7A.6c.1 (12) | |||||
Y113G7A.6a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 0 | deleterious | ||||
PolyPhen | 0.991 | probably_damaging | ||||
HGVSc | Y113G7A.6a.1:c.698C>T | |||||
HGVSp | CE31090:p.Ala233Val | |||||
cDNA_position | 700 | |||||
CDS_position | 698 | |||||
Protein_position | 233 | |||||
Exon_number | 7/11 | |||||
Codon_change | gCc/gTc | |||||
Amino_acid_change | A/V | |||||
Y113G7A.6b.1 (12) | ||||||
Y113G7A.6d.1 (12) | ||||||
Interactor | WBInteraction000504752 | |||||
Genetics | Interpolated_map_position | V | 24.5141 | |||
Reference | WBPaper00004879 | |||||
Method | Substitution_allele |