WormBase Tree Display for Variation: WBVar00093867

WBVar00093867 Name: Public_name: ok2769
    Other_name: F25C8.3a.1:c.7407+4_8800del
      F25C8.3c.1:c.7317+4_8710del
      F25C8.3e.1:c.7212+4_8605del
      F25C8.3d.1:c.7521+4_8914del
      F25C8.3b.1:c.7344+4_8737del
    HGVSg: CHROMOSOME_V:g.20895593_20897228del
  Sequence_details: SMap: S_parent: Sequence: F25C8
    Flanking_sequences: gagagcaaaaggagtcatcatatgttggta tgtggcccagagttgctcgaattgtcaaag
    Mapping_target: F25C8
    Type_of_mutation: Deletion
    PCR_product: ok2769_external
      ok2769_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032777
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006812
    Transcript: F25C8.3d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F25C8.3d.1:c.7521+4_8914del
        cDNA_position: ?-8914
        CDS_position: ?-8914
        Protein_position: ?-2972
        Intron_number: 30-33/36
        Exon_number: 31-34/37
      F25C8.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F25C8.3b.1:c.7344+4_8737del
        cDNA_position: ?-8990
        CDS_position: ?-8737
        Protein_position: ?-2913
        Intron_number: 28-31/35
        Exon_number: 29-32/36
      F25C8.3e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F25C8.3e.1:c.7212+4_8605del
        cDNA_position: ?-8605
        CDS_position: ?-8605
        Protein_position: ?-2869
        Intron_number: 26-29/33
        Exon_number: 27-30/34
      F25C8.3c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F25C8.3c.1:c.7317+4_8710del
        cDNA_position: ?-8710
        CDS_position: ?-8710
        Protein_position: ?-2904
        Intron_number: 28-31/34
        Exon_number: 29-32/35
      F25C8.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F25C8.3a.1:c.7407+4_8800del
        cDNA_position: ?-8800
        CDS_position: ?-8800
        Protein_position: ?-2934
        Intron_number: 29-32/36
        Exon_number: 30-33/37
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele