WormBase Tree Display for Variation: WBVar00093672
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WBVar00093672 | Name | Public_name | ok2540 | ||
---|---|---|---|---|---|
Other_name | F56B6.2i.1:c.1491+102_1492-550del | ||||
F56B6.2h.1:c.1500+102_1501-550del | |||||
F56B6.2c.1:c.300+102_301-550del | |||||
F56B6.2j.1:c.1494+102_1495-550del | |||||
F56B6.2b.1:c.1374+102_1375-550del | |||||
F56B6.2a.1:c.1485+102_1486-550del | |||||
HGVSg | CHROMOSOME_X:g.3548021_3549511del | ||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | |
Flanking_sequences | cgttgcctttcattgcccacgcacccgcta | cagattcaatgttgaacacttatctgagaa | |||
Mapping_target | F56B6 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok2540_external | ||||
ok2540_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032622 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004350 | |||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2j.1:c.1494+102_1495-550del | ||||
Intron_number | 8/14 | ||||
F56B6.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2i.1:c.1491+102_1492-550del | ||||
Intron_number | 9/16 | ||||
F56B6.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2b.1:c.1374+102_1375-550del | ||||
Intron_number | 8/15 | ||||
F56B6.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2a.1:c.1485+102_1486-550del | ||||
Intron_number | 9/16 | ||||
F56B6.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2h.1:c.1500+102_1501-550del | ||||
Intron_number | 9/16 | ||||
F56B6.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.2c.1:c.300+102_301-550del | ||||
Intron_number | 3/9 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |