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WormBase Tree Display for Variation: WBVar00093672

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Name Class

WBVar00093672NamePublic_nameok2540
Other_nameF56B6.2i.1:c.1491+102_1492-550del
F56B6.2h.1:c.1500+102_1501-550del
F56B6.2c.1:c.300+102_301-550del
F56B6.2j.1:c.1494+102_1495-550del
F56B6.2b.1:c.1374+102_1375-550del
F56B6.2a.1:c.1485+102_1486-550del
HGVSgCHROMOSOME_X:g.3548021_3549511del
Sequence_detailsSMapS_parentSequenceF56B6
Flanking_sequencescgttgcctttcattgcccacgcacccgctacagattcaatgttgaacacttatctgagaa
Mapping_targetF56B6
Type_of_mutationDeletion
PCR_productok2540_external
ok2540_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00032622
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00004350
TranscriptF56B6.2j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2j.1:c.1494+102_1495-550del
Intron_number8/14
F56B6.2i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2i.1:c.1491+102_1492-550del
Intron_number9/16
F56B6.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2b.1:c.1374+102_1375-550del
Intron_number8/15
F56B6.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2a.1:c.1485+102_1486-550del
Intron_number9/16
F56B6.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2h.1:c.1500+102_1501-550del
Intron_number9/16
F56B6.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2c.1:c.300+102_301-550del
Intron_number3/9
IsolationMutagenEMS
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele