WormBase Tree Display for Variation: WBVar00093558
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| WBVar00093558 | Name | Public_name | ok2409 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_X:g.4591157_4591720del | ||||
| Sequence_details | SMap | S_parent | Sequence | C05E11 | |
| Flanking_sequences | agcttttataaatatcagcctaaatttggc | gggttttcttgctgggccccataagacgag | |||
| Mapping_target | C05E11 | ||||
| Type_of_mutation | Deletion | ||||
| PCR_product | ok2409_external | ||||
| ok2409_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032552 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001455 | |||
| Transcript | C05E11.8a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| Intron_number | 2-3/4 | ||||
| Exon_number | 3-5/5 | ||||
| Isolation | Mutagen | UV/TMP | |||
| Description | Phenotype (14) | ||||
| Reference | WBPaper00043908 | ||||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
