WormBase Tree Display for Variation: WBVar00093434

WBVar00093434 Name: Public_name: ok2273
    HGVSg: CHROMOSOME_X:g.11548593_11549784del
  Sequence_details: SMap: S_parent: Sequence: C35C5
    Flanking_sequences: attttcgccaacttttcattccctaacttt ttttgttgaaactcataaaactatatcttg
    Mapping_target: C35C5
    Type_of_mutation: Deletion
    PCR_product: ok2273_external
      ok2273_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032460
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003239
    Transcript: C35C5.4b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/1
        Exon_number: 1/2
      C35C5.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-3/4
        Exon_number: 1-3/5
  Isolation: Mutagen: EMS
  Description: Phenotype_not_observed: WBPhenotype:0000633 Paper_evidence: WBPaper00045955
        Curator_confirmed: WBPerson557
        Remark: Animals did not have PLM branch defects. Paper_evidence: WBPaper00045955
            Curator_confirmed: WBPerson557
  Reference: WBPaper00045955
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele