WormBase Tree Display for Variation: WBVar00093332

WBVar00093332 Name: Public_name: ok2157
    Other_name: F57C12.4.1:c.3370-124_4416del
    HGVSg: CHROMOSOME_X:g.564432_565788del
  Sequence_details: SMap: S_parent: Sequence: F57C12
    Flanking_sequences: gttcagacgatgtgcaattgttagaacagt gcgcaccaagggtgtcggtttttcgatttt
    Mapping_target: F57C12
    Type_of_mutation: Deletion
    PCR_product: ok2157_external
      ok2157_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032405
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003408
    Transcript: F57C12.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F57C12.4.1:c.3370-124_4416del
        cDNA_position: ?-4474
        CDS_position: ?-4416
        Protein_position: ?-1472
        Intron_number: 13-17/19
        Exon_number: 14-18/20
    Interactor: WBInteraction000051746
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele