WormBase Tree Display for Variation: WBVar00092844

WBVar00092844 Name: Public_name: ok1636
    Other_name: F53B3.1.2:c.131+13_876del
      F53B3.1.1:c.131+13_876del
    HGVSg: CHROMOSOME_X:g.2855477_2857043del
  Sequence_details: SMap: S_parent: Sequence: F53B3
    Flanking_sequences: aaaataaacggaaaactgctgaacctacta aaaaaaacttactccattgttgaggatgaa
    Mapping_target: F53B3
    Type_of_mutation: Deletion
    PCR_product: ok1636_external
      ok1636_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036389
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00018740
    Transcript: F53B3.1.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F53B3.1.2:c.131+13_876del
        cDNA_position: ?-961
        CDS_position: ?-876
        Protein_position: ?-292
        Intron_number: 4-5/10
        Exon_number: 5-6/11
      F53B3.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F53B3.1.1:c.131+13_876del
        cDNA_position: ?-884
        CDS_position: ?-876
        Protein_position: ?-292
        Intron_number: 3-4/9
        Exon_number: 4-5/10
    Interactor: WBInteraction000500268
      WBInteraction000500269
      WBInteraction000500270
      WBInteraction000500271
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele