WormBase Tree Display for Variation: WBVar00091674
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| WBVar00091674 | Name | Public_name | ok377 | ||||
|---|---|---|---|---|---|---|---|
| Other_name | F59D12.4.1:c.482_643-201del | ||||||
| HGVSg | CHROMOSOME_X:g.15683341_15684534del | ||||||
| Sequence_details | SMap | S_parent | Sequence | C03H12 | |||
| Flanking_sequences | aaaaacaaatatttcagtattcaatcacaa | attggtggaggactgagtcaagcttgcaaa | |||||
| Mapping_target | C03H12 | ||||||
| Type_of_mutation | Deletion | ||||||
| PCR_product | OK377_external | ||||||
| OK377_internal | |||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00035602 | ||||||
| Laboratory | RB | ||||||
| Person | WBPerson46 | ||||||
| KO_consortium_allele | |||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001687 | |||||
| Transcript | F59D12.4.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F59D12.4.1:c.482_643-201del | ||||||
| cDNA_position | 607-? | ||||||
| CDS_position | 482-? | ||||||
| Protein_position | 161-? | ||||||
| Intron_number | 4/10 | ||||||
| Exon_number | 4/11 | ||||||
| Interactor | WBInteraction000521942 | ||||||
| Isolation | Mutagen | UV/TMP | |||||
| Genetics | Mapping_data | In_multi_point | 4383 | ||||
| Description | Phenotype_not_observed | WBPhenotype:0000022 | Paper_evidence | WBPaper00029002 | |||
| Curator_confirmed | WBPerson557 | ||||||
| WBPhenotype:0001652 | Paper_evidence | WBPaper00032446 | |||||
| Curator_confirmed | WBPerson2021 | ||||||
| WBPhenotype:0001767 | Paper_evidence | WBPaper00032413 | |||||
| Curator_confirmed | WBPerson2021 | ||||||
| Remark | No significant defects in embryonic DA/DB motor neuron left/right projection patterns (Figure S1A). | Paper_evidence | WBPaper00032413 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Variation_effect | Null | Paper_evidence | WBPaper00032413 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Reference | WBPaper00032446 | ||||||
| WBPaper00032413 | |||||||
| WBPaper00029002 | |||||||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||||
| Method | KO_consortium_allele |
