WormBase Tree Display for Variation: WBVar00091445
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WBVar00091445 | Evidence | Paper_evidence | WBPaper00024415 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | oj5 | |||||||
Other_name | Y34D9A.4.1:c.247C>T | ||||||||
CE37061:p.Arg83Trp | |||||||||
HGVSg | CHROMOSOME_I:g.1033137G>A | ||||||||
Sequence_details | SMap | S_parent | Sequence | Y34D9A | |||||
Flanking_sequences | cgcgaggacatgcaaaatgtcaaaaagatg | ggctcgagctggaaatggaggattttcagc | |||||||
Mapping_target | Y34D9A | ||||||||
Type_of_mutation | Substitution | c | t | ||||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00040350 | ||||||||
Laboratory | WH | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00004952 | |||||||
Transcript | Y34D9A.4.1 (12) | ||||||||
Interactor | WBInteraction000500943 | ||||||||
WBInteraction000500944 | |||||||||
WBInteraction000500945 | |||||||||
WBInteraction000500949 | |||||||||
WBInteraction000500954 | |||||||||
WBInteraction000500957 | |||||||||
Genetics | Interpolated_map_position | I | -17.3773 | ||||||
Description | Phenotype | WBPhenotype:0000050 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | strong | Paper_evidence | WBPaper00003120 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00003120 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000059 | Paper_evidence | WBPaper00003120 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Penetrance | Low | 0-10% | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000643 | Paper_evidence | WBPaper00003120 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | animals are strong Stu (sterile, uncoordinated) | Paper_evidence | WBPaper00003120 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000688 | Paper_evidence | WBPaper00003120 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | animals are Stu (sterile, uncoordinated) | Paper_evidence | WBPaper00003120 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Penetrance | Complete | <100% | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000697 | Paper_evidence | WBPaper00003120 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000759 | Paper_evidence | WBPaper00003120 | |||||||
WBPaper00047056 | |||||||||
Curator_confirmed | WBPerson712 | ||||||||
WBPerson15300 | |||||||||
Penetrance | Low | 0-10% | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0001018 | Paper_evidence | WBPaper00003120 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Penetrance | Low | 0-10% | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00003120 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0002408 | Paper_evidence | WBPaper00042416 | |||||||
Curator_confirmed | WBPerson3249 | ||||||||
EQ_annotations | GO_term | GO:0000910 | PATO:0000460 | Paper_evidence | WBPaper00042416 | ||||
Curator_confirmed | WBPerson3249 | ||||||||
Phenotype_not_observed | WBPhenotype:0000699 | Paper_evidence | WBPaper00003120 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Reference | WBPaper00018058 | ||||||||
WBPaper00012305 | |||||||||
WBPaper00003120 | |||||||||
WBPaper00025715 | |||||||||
WBPaper00042416 | |||||||||
WBPaper00047056 | |||||||||
Remark | Author has confirmed that oj5 mutation is R(83) not R(63) | Paper_evidence | WBPaper00024415 | ||||||
Curator_confirmed | WBPerson2861 | ||||||||
Method | Substitution_allele |