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WormBase Tree Display for Variation: WBVar00091417

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Name Class

WBVar00091417NamePublic_namenu199
Other_nameC09E10.2b.1:c.964+1G>A
C09E10.2e.1:c.865+1G>A
C09E10.2d.1:c.840+325G>A
C09E10.2c.1:c.834+325G>A
C09E10.2a.1:c.958+1G>A
HGVSgCHROMOSOME_X:g.988608C>T
Sequence_detailsSMapS_parentSequenceC09E10
Flanking_sequencesgatattatattactcaagtggtcggcgaggtaagcctgaccgcgtacgaataatttattc
Mapping_targetC09E10
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00003697
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryKP
StatusLive
AffectsGeneWBGene00000958
TranscriptC09E10.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09E10.2d.1:c.840+325G>A
Intron_number6/13
C09E10.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC09E10.2c.1:c.834+325G>A
Intron_number6/13
C09E10.2a.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScC09E10.2a.1:c.958+1G>A
Intron_number8/17
C09E10.2e.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScC09E10.2e.1:c.865+1G>A
Intron_number6/14
C09E10.2b.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScC09E10.2b.1:c.964+1G>A
Intron_number8/17
InteractorWBInteraction000555812
GeneticsInterpolated_map_positionX-18.8704
DescriptionPhenotypeWBPhenotype:0001468Paper_evidenceWBPaper00032215
Curator_confirmedWBPerson712
RemarkAnimals exhibited enhanced attraction to benzaldehyde compared to wild type.Paper_evidenceWBPaper00032215
Curator_confirmedWBPerson712
Affected_byMoleculeWBMol:00002087Paper_evidenceWBPaper00032215
Curator_confirmedWBPerson712
WBPhenotype:0001469Paper_evidenceWBPaper00032215
Curator_confirmedWBPerson712
RemarkAnimals exhibited enhanced attraction to butanone compared to wild type.Paper_evidenceWBPaper00032215
Curator_confirmedWBPerson712
Affected_byMoleculeWBMol:00005086Paper_evidenceWBPaper00032215
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000641Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
RemarkAnimals exhibit a similar Dispersal Index (DI) as N2.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Phenotype_assayTreatmentDispersal assay as reported in Crowder et al.1996; van Swinderen et al. 1997. Disperal measured in air.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
WBPhenotype:0001618Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
RemarkAnimals exhibit an EC50 for halothane statistically insignificant from that of N2 as determined by a concentration-response curve based on animal dispersal indexes.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Variation_effectProbable_null_via_phenotypePaper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Affected_byMoleculeWBMol:00001705Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Phenotype_assayTemperature25CPaper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Genotypegoa-1(syIs17)Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
WBPhenotype:0001619Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
RemarkAnimals exhibit an EC50 for isoflurane statistically insignificant from that of N2 as determined by a concentration-response curve based on animal dispersal indexes.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Variation_effectProbable_null_via_phenotypePaper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Affected_byMoleculeWBMol:00004563Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Phenotype_assayTemperature25CPaper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Genotypegoa-1(syIs17)Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
ReferenceWBPaper00004721
WBPaper00003697
WBPaper00032215
MethodSubstitution_allele