WormBase Tree Display for Variation: WBVar00091396
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| WBVar00091396 | Evidence | Paper_evidence | WBPaper00003509 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | nr2073 | ||||
| Other_name | K03E6.1b.1:c.292_925delinsTTATAAA | |||||
| K03E6.1b.2:c.292_925delinsTTATAAA | ||||||
| CE45007:p.Tyr99_Ter309delinsTer | ||||||
| K03E6.1a.1:c.292_*674delinsTTATAAA | ||||||
| HGVSg | CHROMOSOME_X:g.1077610_1079313delinsTTATAAA | |||||
| Sequence_details | SMap | S_parent | Sequence | K03E6 | ||
| Flanking_sequences | cagatgtctccaatatgtcaatctttcagg | aaatttattttccatatcactcttgacttt | ||||
| Mapping_target | K03E6 | |||||
| Type_of_mutation | Insertion | TTATAAA | Paper_evidence | WBPaper00003509 | ||
| Deletion | ||||||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00029278 | |||||
| WBStrain00029465 | ||||||
| WBStrain00029477 | ||||||
| Laboratory | NS | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00002988 | ||||
| Transcript | K03E6.1b.2 (11) | |||||
| K03E6.1a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant | ||||
| VEP_impact | HIGH | |||||
| HGVSc | K03E6.1a.1:c.292_*674delinsTTATAAA | |||||
| cDNA_position | 366-1681 | |||||
| CDS_position | 292-? | |||||
| Protein_position | 98-? | |||||
| Intron_number | 6-8/9 | |||||
| Exon_number | 6-10/10 | |||||
| K03E6.1b.1 (11) | ||||||
| Interactor (17) | ||||||
| Genetics | Interpolated_map_position | X | -18.744 | |||
| Description (2) | ||||||
| Reference | WBPaper00038390 | |||||
| WBPaper00006052 | ||||||
| WBPaper00003509 | ||||||
| WBPaper00015696 | ||||||
| WBPaper00049336 | ||||||
| Method | Deletion_and_insertion_allele |
