WormBase Tree Display for Variation: WBVar00090757

WBVar00090757 Evidence: Paper_evidence: WBPaper00013412
  Name: Public_name: n3712
    Other_name: CE53926:p.Trp2600Ter
      C47D12.1b.1:c.7799G>A
      CE53987:p.Trp2589Ter
      C47D12.1a.1:c.7799G>A
      CE53895:p.Trp2600Ter
      C47D12.1c.1:c.7766G>A
    HGVSg: CHROMOSOME_II:g.11667166C>T
  Sequence_details: SMap: S_parent: Sequence: C47D12
    Flanking_sequences: gaatgaaatatatcatgcaaaatcaagatt gtccaagttcaaacacgcgttttggttgaa
    Mapping_target: C47D12
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00013412
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00007028
    Transcript: C47D12.1c.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C47D12.1c.1:c.7766G>A
        HGVSp: CE53987:p.Trp2589Ter
        cDNA_position: 7766
        CDS_position: 7766
        Protein_position: 2589
        Exon_number: 14/22
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C47D12.1a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C47D12.1a.1:c.7799G>A
        HGVSp: CE53926:p.Trp2600Ter
        cDNA_position: 7870
        CDS_position: 7799
        Protein_position: 2600
        Exon_number: 15/24
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C47D12.1b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C47D12.1b.1:c.7799G>A
        HGVSp: CE53895:p.Trp2600Ter
        cDNA_position: 7799
        CDS_position: 7799
        Protein_position: 2600
        Exon_number: 14/23
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
    Interactor: WBInteraction000500672
      WBInteraction000500673
      WBInteraction000500682
      WBInteraction000500683
  Genetics: Interpolated_map_position: II 3.89973
  Reference: WBPaper00013412
  Method: Substitution_allele