WormBase Tree Display for Variation: WBVar00090645

WBVar00090645 Evidence: Paper_evidence: WBPaper00005800
  Name: Public_name: n3037
    Other_name: CE25190:p.Arg225Ter
      Y110A2AL.14.1:c.673C>T
    HGVSg: CHROMOSOME_II:g.2891322G>A
  Sequence_details: SMap: S_parent: Sequence: Y110A2AL
    Flanking_sequences: ggtggttatgtgctctcttatgagctcatt gattcttggcaatcaatgcccaactcttcc
    Mapping_target: Y110A2AL
    Type_of_mutation: Substitution: c t Paper_evidence: WBPaper00005800
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00005020
    Transcript: Y110A2AL.14.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: Y110A2AL.14.1:c.673C>T
        HGVSp: CE25190:p.Arg225Ter
        cDNA_position: 688
        CDS_position: 673
        Protein_position: 225
        Exon_number: 4/6
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
  Genetics: Interpolated_map_position: II -9.49631
  Description: Phenotype (12)
    Phenotype_not_observed: WBPhenotype:0000707 Paper_evidence: WBPaper00031153
        Curator_confirmed: WBPerson712
        Remark: Homozygous larva from either heterozygous or homozygous hermaphrodites do not have pharyngeal development defects (0/80). Paper_evidence: WBPaper00031153
            Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000023 PATO:0000460 Paper_evidence: WBPaper00031153
                Curator_confirmed: WBPerson712
  Reference: WBPaper00003405
    WBPaper00031153
    WBPaper00005800
  Method: Substitution_allele