WormBase Tree Display for Variation: WBVar00090566

WBVar00090566 Evidence: Paper_evidence: WBPaper00026688
  Name: Public_name: n2739
    Other_name: CE20455:p.Arg304Ter
      B0454.1.1:c.910A>T
    HGVSg: CHROMOSOME_II:g.3058824A>T
  Sequence_details: SMap: S_parent: Sequence: Y25C1A
    Flanking_sequences: tttagtgctcagccggcgccggcgccagtt gagaggccccaagcccagttgtggagaatg
    Mapping_target: Y25C1A
    Type_of_mutation: Substitution: a t Paper_evidence: WBPaper00026688
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00002997
    Transcript: B0454.1.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: B0454.1.1:c.910A>T
        HGVSp: CE20455:p.Arg304Ter
        cDNA_position: 923
        CDS_position: 910
        Protein_position: 304
        Exon_number: 4/6
        Codon_change: Aga/Tga
        Amino_acid_change: R/*
    Interactor: WBInteraction000052298
      WBInteraction000052443
  Isolation: Mutagen: EMS Paper_evidence: WBPaper00026688
    Forward_genetics: Screen for class A synMuv Paper_evidence: WBPaper00026688
  Genetics: Interpolated_map_position: II -8.63399
  Description: Phenotype_not_observed: WBPhenotype:0000700 Paper_evidence: WBPaper00026688
        Curator_confirmed: WBPerson712
        Remark: Class A synMuv. Paper_evidence: WBPaper00026688
            Curator_confirmed: WBPerson712
        Penetrance: Incomplete: Paper_evidence: WBPaper00026688
              Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00026688
          Curator_confirmed: WBPerson712
        Variation_effect: Hypomorph_reduction_of_function: Paper_evidence: WBPaper00026688
            Curator_confirmed: WBPerson712
  Reference: WBPaper00026688
  Remark: Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00002997 Opal_UGA R(304) to stop Paper_evidence: WBPaper00026688
  Method: Substitution_allele