WormBase Tree Display for Variation: WBVar00090352
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| WBVar00090352 | Name | Public_name | n2095 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence_details | SeqStatus | Pending_curation | |||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain | WBStrain00027175 | ||||||||
| Laboratory | MT | ||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00000420 | |||||||
| Interactor | WBInteraction000521805 | ||||||||
| WBInteraction000556868 | |||||||||
| WBInteraction000556869 | |||||||||
| Description | Phenotype | WBPhenotype:0000243 | Paper_evidence | WBPaper00044390 | |||||
| Person_evidence | WBPerson261 | ||||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPerson2987 | |||||||||
| Remark | killer cells fail to engulf target cells; engulfment group A (ced-1,6,7); extensive maternal rescue | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Clustering of CED-1-GFP around cell corpses and its release from phagosomes were both severely affected in ced-6(n2095) mutants (Figure 1A) | Paper_evidence | WBPaper00044390 | |||||||
| Curator_confirmed | WBPerson2987 | ||||||||
| Maternal | With_maternal_effect | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Genotype | CED-1-GFP | Paper_evidence | WBPaper00044390 | |||||
| Curator_confirmed | WBPerson2987 | ||||||||
| WBPhenotype:0000885 | Paper_evidence | WBPaper00001438 | |||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Remark | Failure to engulf cell corpses | Paper_evidence | WBPaper00001438 | ||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Penetrance | Complete | Paper_evidence | WBPaper00001438 | ||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Recessive | Paper_evidence | WBPaper00001438 | |||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| EQ_annotations | Anatomy_term | WBbt:0003681 | PATO:0000460 | Paper_evidence | WBPaper00001438 | ||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Life_stage | WBls:0000024 | PATO:0000460 | Paper_evidence | WBPaper00001438 | |||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Maternal | |||||||||
| WBPhenotype:0001172 | Person_evidence | WBPerson261 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | programmed cell deaths abnormal, dying cells arrest at highly refractile stage; extensive maternal rescue | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Maternal | With_maternal_effect | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0002408 | Paper_evidence | WBPaper00041869 | |||||||
| Curator_confirmed | WBPerson3772 | ||||||||
| Phenotype_not_observed | WBPhenotype:0000520 | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | no gross phenotype | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Maternal | With_maternal_effect | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Reference | WBPaper00022509 | ||||||||
| WBPaper00003090 | |||||||||
| WBPaper00041869 | |||||||||
| WBPaper00001438 | |||||||||
| WBPaper00015205 | |||||||||
| WBPaper00011336 | |||||||||
| WBPaper00010757 | |||||||||
| WBPaper00026165 | |||||||||
| WBPaper00044390 | |||||||||
| Remark | The n2095 allele carries a comlex rearrangement in the region that covers at least part of F56D2.7, but not affect the neighbouring C05D2.6B transcript | Paper_evidence | WBPaper00003090 | ||||||
| Method | Allele |
