WormBase Tree Display for Variation: WBVar00090265
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| WBVar00090265 | Name | Public_name | n1792 | ||
|---|---|---|---|---|---|
| Other_name | E01A2.3.1:c.299G>A | ||||
| CE24870:p.Trp100Ter | |||||
| HGVSg | CHROMOSOME_I:g.4127063G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | E01A2 | |
| Flanking_sequences | aactgtgcgaatcgtttgagatttcagcaat | ggattgttcggaagctggaaatattatgcatgatcc | |||
| Mapping_target | E01A2 | ||||
| Type_of_mutation | Substitution | g | a | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00007443 | ||||
| WBStrain00007444 | |||||
| WBStrain00007452 | |||||
| WBStrain00007455 | |||||
| WBStrain00008497 | |||||
| WBStrain00024027 | |||||
| WBStrain00027124 | |||||
| WBStrain00027149 | |||||
| WBStrain00027208 | |||||
| Laboratory | MT | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00003029 | |||
| Transcript | E01A2.3.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | E01A2.3.1:c.299G>A | ||||
| HGVSp | CE24870:p.Trp100Ter | ||||
| cDNA_position | 421 | ||||
| CDS_position | 299 | ||||
| Protein_position | 100 | ||||
| Exon_number | 3/9 | ||||
| Codon_change | tGg/tAg | ||||
| Amino_acid_change | W/* | ||||
| Interactor (38) | |||||
| Isolation | Mutagen | EMS | |||
| Genetics | Interpolated_map_position | I | -1.71531 | ||
| Mapping_data | In_multi_point | 1679 | |||
| 1680 | |||||
| 1681 | |||||
| 1682 | |||||
| 1683 | |||||
| 1684 | |||||
| 1685 | |||||
| 1686 | |||||
| 1688 | |||||
| 2131 | |||||
| In_pos_neg_data | 4742 | ||||
| 4743 | |||||
| 4744 | |||||
| 6117 | |||||
| 6118 | |||||
| 6119 | |||||
| Description | Phenotype (15) | ||||
| Phenotype_not_observed (14) | |||||
| Reference (30) | |||||
| Method | Substitution_allele |
