WormBase Tree Display for Variation: WBVar00090244
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| WBVar00090244 | Evidence | Paper_evidence | WBPaper00001768 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | n1760 | |||||
| Other_name | CE03975:p.Ter210LysextTer? | ||||||
| HGVSg | |||||||
| Sequence_details | SMap | S_parent | Sequence | C07H6 | |||
| Flanking_sequences | tttcaaatataaaacactctgtttcaggtc | aaatttggtttcaaaatcgacgaatgaagc | |||||
| Mapping_target | C07H6 | ||||||
| Type_of_mutation | Substitution | t | a | Paper_evidence | WBPaper00001768 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004825 | ||||||
| WBStrain00027110 | |||||||
| WBStrain00027111 | |||||||
| WBStrain00027284 | |||||||
| WBStrain00027285 | |||||||
| WBStrain00027286 | |||||||
| WBStrain00027288 | |||||||
| WBStrain00027300 | |||||||
| Laboratory | MT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003024 | |||||
| Transcript | C07H6.7.2 | VEP_consequence | stop_lost | ||||
| VEP_impact | HIGH | ||||||
| SIFT | 1 | tolerated_low_confidence | |||||
| HGVSp | CE03975:p.Ter210LysextTer? | ||||||
| cDNA_position | 733 | ||||||
| CDS_position | 628 | ||||||
| Protein_position | 210 | ||||||
| Exon_number | 5/7 | ||||||
| Codon_change | Taa/Aaa | ||||||
| Amino_acid_change | */K | ||||||
| C07H6.7.1 | VEP_consequence | stop_lost | |||||
| VEP_impact | HIGH | ||||||
| SIFT | 1 | tolerated_low_confidence | |||||
| HGVSp | CE03975:p.Ter210LysextTer? | ||||||
| cDNA_position | 671 | ||||||
| CDS_position | 628 | ||||||
| Protein_position | 210 | ||||||
| Exon_number | 5/7 | ||||||
| Codon_change | Taa/Aaa | ||||||
| Amino_acid_change | */K | ||||||
| Interactor (24) | |||||||
| Genetics | Interpolated_map_position | III | -0.681216 | ||||
| Mapping_data | In_multi_point | 2217 | |||||
| In_pos_neg_data | 6697 | ||||||
| Description (2) | |||||||
| Reference | WBPaper00027236 | ||||||
| WBPaper00028400 | |||||||
| WBPaper00022870 | |||||||
| WBPaper00014076 | |||||||
| WBPaper00017748 | |||||||
| WBPaper00003331 | |||||||
| WBPaper00013862 | |||||||
| WBPaper00001861 | |||||||
| WBPaper00001768 | |||||||
| WBPaper00044285 | |||||||
| Method | Substitution_allele |
