WormBase Tree Display for Variation: WBVar00089625
expand all nodes | collapse all nodes | view schema
WBVar00089625 | Evidence | Paper_evidence | WBPaper00005774 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n612 | |||||
Other_name (16) | |||||||
HGVSg | CHROMOSOME_IV:g.1877300G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F55A8 | |||
Flanking_sequences | acgattacaccgcccgtttctacgtggcct | cgtgctcgagggtctcgaatatctgcatcg | |||||
Mapping_target | F55A8 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00005774 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00026828 | ||||||
Laboratory | MT | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00001173 | |||||
Transcript | F55A8.2g.1 (12) | ||||||
F55A8.2e.1 (12) | |||||||
F55A8.2d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F55A8.2d.1:c.493-2544G>A | ||||||
Intron_number | 3/3 | ||||||
F55A8.2f.1 (12) | |||||||
F55A8.2b.1 (12) | |||||||
F55A8.2c.1 (12) | |||||||
F55A8.2h.1 (12) | |||||||
F55A8.2a.2 (12) | |||||||
F55A8.2a.1 (12) | |||||||
Genetics | Interpolated_map_position | IV | -14.2332 | ||||
Description | Phenotype (18) | ||||||
Phenotype_not_observed (8) | |||||||
Reference | WBPaper00004310 | ||||||
WBPaper00000635 | |||||||
WBPaper00017625 | |||||||
WBPaper00011220 | |||||||
WBPaper00023070 | |||||||
Method | Substitution_allele |