WormBase Tree Display for Variation: WBVar00089611

WBVar00089611 Evidence: Paper_evidence: WBPaper00003383
  Name: Public_name: n585
    Other_name: W08D2.1.1:c.295T>A
      W08D2.1.2:c.295T>A
      CE25152:p.Cys99Ser
      W08D2.1.3:c.295T>A
    HGVSg: CHROMOSOME_IV:g.9815126A>T
  Sequence_details: SMap: S_parent: Sequence: W08D2
    Flanking_sequences: acttacctctcaaatttgaacttattctcgc ttctcgaattgcttcacgaactccgcgagc
    Mapping_target: W08D2
    Type_of_mutation: Substitution: a t Curator_confirmed: WBPerson4055
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (11)
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00001188
    Transcript: W08D2.1.3 (12)
      W08D2.1.1 (12)
      W08D2.1.2 (12)
    Interactor: WBInteraction000000779
      WBInteraction000001263
      WBInteraction000001264
      WBInteraction000001265
      WBInteraction000002715
      WBInteraction000009162
      WBInteraction000052308
      WBInteraction000052315
      WBInteraction000500063
      WBInteraction000500475
      WBInteraction000500476
      WBInteraction000500480
      WBInteraction000500485
      WBInteraction000500497
      WBInteraction000502196
      WBInteraction000502197
      WBInteraction000502307
      WBInteraction000518428
      WBInteraction000520763
      WBInteraction000524011
      WBInteraction000524017
      WBInteraction000524199
      WBInteraction000524379
      WBInteraction000524380
      WBInteraction000524381
      WBInteraction000524382
      WBInteraction000524383
      WBInteraction000524384
      WBInteraction000535395
      WBInteraction000538624
      WBInteraction000538625
      WBInteraction000538641
      WBInteraction000538642
      WBInteraction000538644
      WBInteraction000538649
      WBInteraction000538663
      WBInteraction000538665
      WBInteraction000538758
      WBInteraction000538763
      WBInteraction000538764
      WBInteraction000538765
      WBInteraction000538766
      WBInteraction000558199
  Genetics: Interpolated_map_position: IV 4.42311
    Mapping_data: In_2_point: 729
      In_multi_point: 625
        1909
        1910
        1911
        1912
        2046
        2090
      In_pos_neg_data: 5746
        6020
        6021
        6022
  Description: Phenotype (24)
    Phenotype_not_observed (14)
  Reference (32)
  Remark: Variation flanks and nucleotide change automatically updated to be on the positive strand to fix mapping and gff dumping issues.
    [200224 mh6] reverse complemented/swapped the change and flanks to move the variation onto the plus strand Curator_confirmed: WBPerson4055
  Method: Substitution_allele