WormBase Tree Display for Variation: WBVar00089599

WBVar00089599 Evidence: Person_evidence: WBPerson27644
  Name: Public_name: n566
    Other_name: ZC247.3.1:c.593-290_593-3del
    HGVSg: CHROMOSOME_I:g.10251554_10251841del
  Sequence_details: SMap: S_parent: Sequence: ZC247
    Flanking_sequences: aaaaagtcaaaaaagaattcccagatttca agtatccaatggatccgaatgcaattccga
    Mapping_target: ZC247
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (21)
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00003000
    Transcript: ZC247.3.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: ZC247.3.1:c.593-290_593-3del
        Intron_number: 5/11
    Interactor: WBInteraction000501516
      WBInteraction000501518
  Genetics: Interpolated_map_position: I 4.78876
    Mapping_data: In_multi_point (28)
      In_pos_neg_data: 5850
        6700
        8072
        8084
        8091
        8104
        8107
        8111
        8114
        8119
  Description: Phenotype: WBPhenotype:0000006 Paper_evidence: WBPaper00000762
        Curator_confirmed: WBPerson2021
        Penetrance: Complete: Paper_evidence: WBPaper00000762
              Curator_confirmed: WBPerson2021
          Range: 100 100 Paper_evidence: WBPaper00000762
                Curator_confirmed: WBPerson2021
        Recessive: Paper_evidence: WBPaper00000762
          Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00000762
                Curator_confirmed: WBPerson2021
      WBPhenotype:0000425 Paper_evidence: WBPaper00004906
        Curator_confirmed: WBPerson2021
        Remark: lin-11 alters odr-7 expression in AWA Paper_evidence: WBPaper00004906
            Curator_confirmed: WBPerson2021
        EQ_annotations: Anatomy_term: WBbt:0005670 PATO:0000460 Paper_evidence: WBPaper00004906
                Curator_confirmed: WBPerson2021
          Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00004906
                Curator_confirmed: WBPerson2021
        Phenotype_assay: Treatment: ODR-7 antibody staining Paper_evidence: WBPaper00004906
              Curator_confirmed: WBPerson2021
      WBPhenotype:0000643 Paper_evidence: WBPaper00000762
        Curator_confirmed: WBPerson2021
        Recessive: Paper_evidence: WBPaper00000762
          Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000762
                Curator_confirmed: WBPerson2021
      WBPhenotype:0000698 Paper_evidence: WBPaper00000762
        Curator_confirmed: WBPerson2021
        Remark: 100 percent of Vul hermaphrodites have a single ventral protrusion Paper_evidence: WBPaper00000762
            Curator_confirmed: WBPerson2021
        Penetrance: Complete: Paper_evidence: WBPaper00000762
              Curator_confirmed: WBPerson2021
          Range: 100 100 Paper_evidence: WBPaper00000762
                Curator_confirmed: WBPerson2021
        Recessive: Paper_evidence: WBPaper00000762
          Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00000762
                Curator_confirmed: WBPerson2021
        Phenotype_assay: Temperature: 20 Paper_evidence: WBPaper00000762
              Curator_confirmed: WBPerson2021
  Reference: WBPaper00004535
    WBPaper00000762
    WBPaper00004906
    WBPaper00014843
    WBPaper00064320
  Remark: Variation information submitted by WBPerson27644 on 2023-05-31_19:06:46 via the Allele submission form. Curator_confirmed: WBPerson51134
  Method: Deletion_allele