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WormBase Tree Display for Variation: WBVar00089527

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Name Class

WBVar00089527EvidencePaper_evidenceWBPaper00002370
NamePublic_namen480
Other_nameCE45947:p.Gly59Glu
F28C1.2c.1:c.176G>A
F28C1.2b.1:c.176G>A
F28C1.2a.1:c.176G>A
CE46003:p.Gly59Glu
CE24928:p.Gly59Glu
HGVSgCHROMOSOME_V:g.12460032C>T
Sequence_detailsSMapS_parentSequenceF28C1
Flanking_sequencesttctgtcaaaagttccatctgtattcaccgacaagatctgattggatggatcatgaaaaa
Mapping_targetF28C1
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00002370
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryMT
StatusLive
AffectsGeneWBGene00001179
TranscriptF28C1.2c.1 (12)
F28C1.2b.1 (12)
F28C1.2a.1 (12)
GeneticsInterpolated_map_positionV4.2605
DescriptionPhenotypeWBPhenotype:0000006Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Semi_dominantPaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
WBPhenotype:0000339Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarkslight bloatingPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
Temperature_sensitiveHeat_sensitivePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000545Paper_evidenceWBPaper00000635
Curator_confirmedWBPerson48
RemarkBoth late-stage and eggs that are not late-stage are laid.Paper_evidenceWBPaper00000635
Curator_confirmedWBPerson48
Temperature_sensitiveHeat_sensitivePaper_evidenceWBPaper00000635
Curator_confirmedWBPerson48
Phenotype_assayTemperature25Paper_evidenceWBPaper00000635
Curator_confirmedWBPerson48
Phenotype_not_observedWBPhenotype:0000641Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
RemarkDispersal index in the absence of anesthetic ~0.80 is decreased compared to N2 ~0.90.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Phenotype_assayTreatmentDispersal assay as reported in Crowder et al.1996; van Swinderen et al. 1997.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
WBPhenotype:0001068Paper_evidenceWBPaper00000635
WBPaper00001133
Person_evidenceWBPerson261
Curator_confirmedWBPerson48
WBPerson2021
WBPerson712
Remarkstimulated by serotonin and by imipraminePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
Semi_dominantPaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Phenotype_assayTemperature25Paper_evidenceWBPaper00000635
Curator_confirmedWBPerson48
WBPhenotype:0001340Paper_evidenceWBPaper00000635
WBPaper00001133
Person_evidenceWBPerson261
Curator_confirmedWBPerson48
WBPerson2021
WBPerson712
Remarkstimulated by imipraminePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
Semi_dominantPaper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00001133
Curator_confirmedWBPerson2021
Phenotype_assayTemperature25Paper_evidenceWBPaper00000635
Curator_confirmedWBPerson48
WBPhenotype:0001618Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
RemarkAnimals exhibit an EC50 for halothane statistically insignificant from that of N2 as determined by a concentration-response curve based on animal dispersal indexes.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Variation_effectHypomorph_reduction_of_functionPaper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Affected_byMoleculeWBMol:00001705Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
WBPhenotype:0001619Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
RemarkAnimals exhibit an EC50 for isoflurane statistically insignificant from that of N2 as determined by a concentration-response curve based on animal dispersal indexes.Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Variation_effectHypomorph_reduction_of_functionPaper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
Affected_byMoleculeWBMol:00004563Paper_evidenceWBPaper00004721
Curator_confirmedWBPerson712
ReferenceWBPaper00000635
WBPaper00001133
WBPaper00004721
WBPaper00011223
MethodSubstitution_allele