WormBase Tree Display for Variation: WBVar00089298

WBVar00089298 Evidence: Paper_evidence: WBPaper00000502
  Name: Public_name: n174
    Other_name (13)
    HGVSg: CHROMOSOME_V:g.6965447G>A
  Sequence_details: SMap: S_parent: Sequence: T07H8
    Flanking_sequences: gggttcttgtaatcagcttcgctatgtttg ttctacaatttgacccgtggaacctgcgat
    Mapping_target: T07H8
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00024622
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00003165
    Transcript: T07H8.4e.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T07H8.4e.1:c.5109G>A
        HGVSp: CE37672:p.Trp1703Ter
        cDNA_position: 5109
        CDS_position: 5109
        Protein_position: 1703
        Exon_number: 25/28
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      T07H8.4g.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T07H8.4g.1:c.4059G>A
        HGVSp: CE37674:p.Trp1353Ter
        cDNA_position: 4059
        CDS_position: 4059
        Protein_position: 1353
        Exon_number: 19/22
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      T07H8.4f.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T07H8.4f.1:c.4701G>A
        HGVSp: CE37673:p.Trp1567Ter
        cDNA_position: 5189
        CDS_position: 4701
        Protein_position: 1567
        Exon_number: 27/30
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      T07H8.4d.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T07H8.4d.1:c.5232G>A
        HGVSp: CE47967:p.Trp1744Ter
        cDNA_position: 5285
        CDS_position: 5232
        Protein_position: 1744
        Exon_number: 28/32
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      T07H8.4a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T07H8.4a.1:c.5268G>A
        HGVSp: CE48078:p.Trp1756Ter
        cDNA_position: 5321
        CDS_position: 5268
        Protein_position: 1756
        Exon_number: 28/32
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      T07H8.4h.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T07H8.4h.1:c.5265G>A
        HGVSp: CE48065:p.Trp1755Ter
        cDNA_position: 5265
        CDS_position: 5265
        Protein_position: 1755
        Exon_number: 27/30
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      T07H8.4d.2 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T07H8.4d.2:c.5232G>A
        HGVSp: CE47967:p.Trp1744Ter
        cDNA_position: 5233
        CDS_position: 5232
        Protein_position: 1744
        Exon_number: 28/31
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
  Genetics: Interpolated_map_position: V 0.48312
  Description: Phenotype: WBPhenotype:0000456 Paper_evidence: WBPaper00000502
        Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00000502
          Curator_confirmed: WBPerson712
      WBPhenotype:0001310 Paper_evidence: WBPaper00000502
        Curator_confirmed: WBPerson712
        Remark: Cell bodies of anterior touch neurons as well as some amphidial neuronal processes are displaced dorsally. Paper_evidence: WBPaper00000502
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00000502
          Curator_confirmed: WBPerson712
      WBPhenotype:0001534 Paper_evidence: WBPaper00000502
        Curator_confirmed: WBPerson712
        Remark: ECM is missing in VC. Paper_evidence: WBPaper00000502
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00000502
          Curator_confirmed: WBPerson712
  Reference: WBPaper00000502
  Method: Substitution_allele