WormBase Tree Display for Variation: WBVar00089029
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WBVar00089029 | Evidence | Person_evidence | WBPerson6998 | ||
---|---|---|---|---|---|
Name | Public_name | mn105 | |||
Other_name | C44H4.4.1:c.2215+5235G>A | ||||
CE43213:p.Gln305Ter | |||||
C44H4.2.1:c.913C>T | |||||
HGVSg | CHROMOSOME_X:g.14579120C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C44H4 | |
Flanking_sequences | ATTCCAGCAAATAGTTTGTCTGGACTGAAG | AACTACGGCAATTGTACCTTGCACACAACA | |||
Mapping_target | C44H4 | ||||
Type_of_mutation | Substitution | c | t | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00034159 | ||||
WBStrain00047866 | |||||
WBStrain00047885 | |||||
Laboratory | SP | ||||
Status | Live | ||||
Affects | Gene | WBGene00002282 | |||
WBGene00008094 | |||||
Transcript | C44H4.4.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C44H4.4.1:c.2215+5235G>A | ||||
Intron_number | 15/20 | ||||
C44H4.2.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | C44H4.2.1:c.913C>T | ||||
HGVSp | CE43213:p.Gln305Ter | ||||
cDNA_position | 1009 | ||||
CDS_position | 913 | ||||
Protein_position | 305 | ||||
Exon_number | 5/11 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Isolation | Mutagen | EMS | |||
Genetics | Interpolated_map_position | X | 16.7518 | ||
Mapping_data | In_2_point | 191 | |||
In_multi_point | 186 | ||||
2651 | |||||
In_pos_neg_data (14) | |||||
Description | Phenotype (15) | ||||
Reference | WBPaper00040698 | ||||
WBPaper00000241 | |||||
Method | Substitution_allele |